Tutorials

Technical descriptions of CellProfiler and CellProfiler Analyst software can be found in our papers. For all CellProfiler tutorials, visit our YouTube playlist.

Exploring Image Data

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Demonstrates some of CellProfiler Analyst’s data exploration features. [PDF]

Scoring Cell Populations

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Provides an example of selecting phenotypes using gating. For applying the machine learning tool to identify a phenotype of interest, watch the tutorial on Classifying Cells with Machine Learning. [PDF]